Package: BiasCorrector 0.2.3.9001

BiasCorrector: A GUI to Correct Measurement Bias in DNA Methylation Analyses

A GUI to correct measurement bias in DNA methylation analyses. The 'BiasCorrector' package just wraps the functions implemented in the 'R' package 'rBiasCorrection' into a shiny web application in order to make them more easily accessible. Publication: Kapsner et al. (2021) <doi:10.1002/ijc.33681>.

Authors:Lorenz A. Kapsner [cre, aut, cph], Evgeny A. Moskalev [aut]

BiasCorrector_0.2.3.9001.tar.gz
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manual.pdf |manual.html✨
card.svg |card.png
BiasCorrector/json (API)

# Install 'BiasCorrector' in R:
install.packages('BiasCorrector', repos = c('https://kapsner.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/kapsner/biascorrector/issues

On CRAN:

Conda:

bias-correctiongene-methylationgeneticsguipcrshiny

3.00 score 2 stars 1 scripts 241 downloads 25 exports 66 dependencies

Last updated from:a11c8d1c50. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK147
source / vignettesOK190
linux-release-x86_64OK130
macos-release-arm64OK200
macos-oldrel-arm64OK208
windows-develOK131
windows-releaseOK136
windows-oldrelOK140
wasm-releaseOK117

Exports:launch_appmodule_calibrationfile_servermodule_calibrationfile_uimodule_correctedplots_servermodule_correctedplots_uimodule_correctedstatistics_uimodule_correctedstats_servermodule_experimentalfile_servermodule_experimentalfile_uimodule_fileupload_servermodule_fileupload_uimodule_info_servermodule_info_uimodule_log_servermodule_log_uimodule_modelselection_servermodule_modelselection_uimodule_plotting_servermodule_plotting_uimodule_results_servermodule_results_uimodule_settings_servermodule_settings_uimodule_statistics_servermodule_statistics_ui

Dependencies:base64encbslibcachemclicodetoolscommonmarkcpp11crosstalkdata.tabledigestDTevaluatefarverfastmapfontawesomefsfuturefuture.applyggplot2globalsgluegtablehighrhtmltoolshtmlwidgetshttpuvisobandjquerylibjsonliteknitrlabelinglaterlazyevallifecyclelistenvmagrittrmemoisemimeminpack.lmnls2otelparallellypolynompromisesprotoR6rappdirsrBiasCorrectionRColorBrewerRcpprlangrmarkdownS7sassscalesshinyshinydashboardshinyjssourcetoolstinytexvctrsviridisLitewithrxfunxtableyaml

Readme and manuals

Help Manual

Help pageTopics
Launch BiasCorrectorlaunch_app
module_calibrationfile_servermodule_calibrationfile_server
module_calibrationfile_uimodule_calibrationfile_ui
module_correctedplots_servermodule_correctedplots_server
module_correctedplots_uimodule_correctedplots_ui
module_correctedstatistics_uimodule_correctedstatistics_ui
module_correctedstats_servermodule_correctedstats_server
module_experimentalfile_servermodule_experimentalfile_server
module_experimentalfile_uimodule_experimentalfile_ui
module_fileupload_servermodule_fileupload_server
module_fileupload_uimodule_fileupload_ui
module_info_servermodule_info_server
module_info_uimodule_info_ui
module_log_servermodule_log_server
module_log_uimodule_log_ui
module_modelselection_servermodule_modelselection_server
module_modelselection_uimodule_modelselection_ui
module_plotting_servermodule_plotting_server
module_plotting_uimodule_plotting_ui
module_results_servermodule_results_server
module_results_uimodule_results_ui
module_settings_servermodule_settings_server
module_settings_uimodule_settings_ui
module_statistics_servermodule_statistics_server
module_statistics_uimodule_statistics_ui