Package: rBiasCorrection 0.3.4.9001

rBiasCorrection: Correct Bias in DNA Methylation Analyses

Implementation of the algorithms (with minor modifications) to correct bias in quantitative DNA methylation analyses as described by Moskalev et al. (2011) <doi:10.1093/nar/gkr213>. Publication: Kapsner et al. (2021) <doi:10.1002/ijc.33681>.

Authors:Lorenz A. Kapsner [cre, aut, cph], Evgeny A. Moskalev [aut]

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rBiasCorrection.pdf |rBiasCorrection.html✨
rBiasCorrection/json (API)

# Install 'rBiasCorrection' in R:
install.packages('rBiasCorrection', repos = c('https://kapsner.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/kapsner/rbiascorrection/issues

Datasets:

On CRAN:

bias-correctiongene-methylationpcr

4.52 score 1 stars 1 packages 5 scripts 1.1k downloads 17 exports 39 dependencies

Last updated 2 years agofrom:3873d8f363. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 11 2024
R-4.5-winOKNov 11 2024
R-4.5-linuxOKNov 11 2024
R-4.4-winOKNov 11 2024
R-4.4-macOKNov 11 2024
R-4.3-winOKNov 11 2024
R-4.3-macOKNov 11 2024

Exports:aggregated_inputbetter_modelbiascorrectionclean_dtclean_upcreate_exampleplotcreatebarerrorplotsget_timestamphandle_text_inputon_startplotting_utilityregression_utilitysolving_equationsstatistics_listsubstitutions_createwrite_csvwrite_log

Dependencies:clicodetoolscolorspacedata.tabledigestfansifarverfuturefuture.applyggplot2globalsgluegtableisobandlabelinglatticelifecyclelistenvmagrittrMASSMatrixmgcvmunsellnlmenls2parallellypillarpkgconfigpolynomprotoR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr

rBiasCorrection

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Last update: 2022-06-19
Started: 2019-12-17

rBiasCorrection: Benchmarking

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Last update: 2020-07-18
Started: 2020-07-16